41. "Of Stress and Tolerance". E. T. Papoutsakis, K. Alsaker, J. Borden, C. J. Paredes, R Bruskiewicz. 10th International Workshop on the Regulation of Metabolism, Genetics and Development of the Solvent- and Acid-forming Clostridia. Wageningen, The Netherlands, September 29 to October 1 (Oral Presentation)
40. "Utilizing Bioluminiscence as a Dynamic, Sensitive, Real-Time Reporter of Butanol Production in Clostridium ABE Fermentation". S.M.Burns-Guydish, W. Dewhirst, E. Hogg, H. Meerman, C. J. Paredes, A. Porter, R. Senaratne, D. C. Walther, S. Wang, L. Yang and Pamela R. Contag. 10th International Workshop on the Regulation of Metabolism, Genetics and Development of the Solvent- and Acid-forming Clostridia. Wageningen, The Netherlands, September 29 to October 1 (Oral Presentation)
39. "Investigation of the transcriptional program of sporulation in Clostridium acetobutylicum". S. W. Jones, C. J. Paredes, N. Cheng, R. Sillers and E. T. Papoutsakis. 10th International Workshop on the Regulation of Metabolism, Genetics and Development of the Solvent- and Acid-forming Clostridia. Wageningen, The Netherlands, September 29 to October 1
38. "Morphological changes of several clostridial strains during continuous cultures". Cobalt's Microbiology, Bioprocessing and Engineering Teams. 10th International Workshop on the Regulation of Metabolism, Genetics and Development of the Solvent- and Acid-forming Clostridia. Wageningen, The Netherlands, September 29 to October 1
37. "Physiology of Butanol Production using Clostridia". C. J. Paredes, Mascoma, Lebanon, NH October 29, 2007 (Oral Presentation).
36. "Physiology of butanol production, secretion and toxicity" C. J. Paredes. Cobalt Biofuels, Mountain View, CA, October 22, 2007 (Oral Presentation)
35. "Transcriptional orchestration and control of clostridial sporulation". S. W. Jones, N. Cheng, B. Tracy, C. J. Paredes, Ryan Sillers, and E. T.. Papoutsakis. Biochemical Engineering XV, Quebec City, Canada, July, 2007. (Oral Presentation)
34. "X-omics for understanding C. acetobutylicum" C. J. Paredes, GEVO, Inc., Pasadena, California USA. February 21 2007. (Oral presentation)
33. "Signaling Pathways Affecting Sporulation and Stationary Phase Phenomena in Clostridium acetobutylicum" R. Sillers, M. Al-Hinai, C. J. Paredes and E. T. Papoutsakis. AIChE 2006 Annual Meeting. San Francisco, California, USA. November 2006. (Oral presentation).
32. "A Gene-Ontology Driven Analysis of Complex Phenotypes" E. T. Papoutsakis, C. J. Paredes, K. V. Alsaker, C. Chen, P. G. Fuhrken and W. M. Miller. AIChE 2006 Annual Meeting. San Francisco, California, USA. November 2006. (Oral presentation).
31. "Metabolic Flux Analysis for medium design and cell line improvement" C. J. Paredes. Genomatica, San Diego, California, USA September 11th 2006.
30. "Signaling pathways affecting sporulation and stationary phase phenomena in Clostridium acetobutylicum". R. Sillers, M. Al-Hinai, C. J. Paredes, and E. T. Papoutsakis. The Ninth International Workshop on the Regulation of Metabolism, Genetics, and Development of the solvent- and acid- forming Clostridia. Rice University’s Clostridium IX meeting. Houston, Texas, USA. May 18-21, 2006
29. "Drowning in data, starving for knowledge: Learning to swim..." C. J. Paredes. Genentech, San Francisco, California, USA. April 20th 2006. (Oral presentation).
28. "Coregulation patterns in Clostridium acetobutylicum" C. J. Paredes, K. V. Alsaker and E. T. Papoutsakis. AIChE 2005 Annual Meeting. Cincinnati, Ohio, USA. October-November 2005. (Oral presentation)
27. "Sporulation regulons and their prediction in clostridia". C. J. Paredes, K. V. Alsaker and E. T. Papoutsakis. AIChE 2005 Annual Meeting. Cincinnati, Ohio, USA. October-November 2005. (Oral presentation)
26. "Regulon prediction and coregulation patterns in Clostridium acetobutylicum". C. J. Paredes, K. V. Alsaker and E. T. Papoutsakis. AIChE 2005 Annual Meeting. Cincinnati, Ohio, USA. October-November 2005.
25. "The Impact of Diffusion on the Design and Use of DNA Microarrays" J. Borden, C. J. Paredes, and E. T. Papoutsakis. Biochemical Engineering XIV, Harrison Hot Springs, BC, Canada. July 2005.
24. "Optimization and use of DNA-array analysis to elucidates cellular stress response from toxic primary metabolites in Clostridium acetobutylicum" K. V. Alsaker, C. J. Paredes, and E. T. Papoutsakis. AIChE 2004 Annual Meeting. Austin, Texas, USA. November 2004. (Oral presentation)
23. "Experimental and Computational Innovation and Quality Control in DNA- Microarray Analysis" E. T. Papoutsakis, K. V. Alsaker, C. J. Paredes, and P. G. Fuhrken. AIChE 2004 Annual Meeting. Austin, Texas, USA. November 2004.
22. "Common Transcriptional Motifs between Bacillus subtilis and Clostridium acetobutylicum" C. J. Paredes and E. Terry Papoutsakis. Metabolic Engineering V: Genome to Product, Lake Tahoe , California, USA. September 2004.
21. "Transcriptional Analysis of Autologous Plasma Effects on Ex Vivo Expanded T Lymphocytes" D. Windgassen, C. G. Ramsborg, J. K. Fallon, C. J. Paredes and E. T. Papoutsakis. Cell Culture Engineering IX, Cancún, México. March 2004.
20. "Expansion and Transcriptional Analysis of T-Cells for Immunotherapy Protocols" C. G. Ramsborg, D. Windgassen, J. K. Fallon, C. J. Paredes and E. T. Papoutsakis. Cell Culture Engineering IX. Cancún, México. March 2004.
19. "Data mining for the transcriptional analysis of ex vivo expanded human T Cells" C. G. Ramsborg, D. Windgassen, J. K. Fallon, C. J. Paredes and E. T. Papoutsakis. Pacific Symposium on Biocomputing, Hawaii, USA January 2004.
18. "DNA-Array Based Transcriptional Analysis of Cell Culture Parameters on Ex Vivo Expanded T Cells" C. G. Ramsborg, D. Windgassen, J. K. Fallon, C. J. Paredes and E. T. Papoutsakis. The American Society of Hematology. 45th Annual Meeting and Exposition. San Diego, California, USA. December 2003.
17. "Transcriptional Unit Annotation And Use Of Prokaryotic Genomes" C. J. Paredes, K. V. Alsaker, C. A. Tomas, S. B. Tummala and E. T. Papoutsakis. AIChE 2003 Annual Meeting. San Francisco, California, USA. November 2003. (Oral presentation)
16. "Optimization and Transcriptional Analysis of T-lymphocyte Expansion", D. Windgassen, C.G. Ramsborg,J. Fallon, C.J. Paredes, and E.T. Papoutsakis. AIChE 2003 Annual Meeting. San Francisco, California, USA. November 2003.
15. "Expansion And Transcriptional Analysis Of T-Lymphocytes For Immunotherapy Protocols" C. Ramsborg, D. Windgassen, C. Paredes, J. Fallon and E. T. Papoutsakis. Biochemical Engineering XIII. Boulder, Colorado, USA. July 2003.
14. "The Transcriptional Organization of Clostridium acetobutylicum" C. J. Paredes, K. V. Alsaker, C. A. Tomas, S. B. Tummala and E. T. Papoutsakis. Biochemical Engineering XIII. Boulder, Colorado, USA. July 2003.
13. "DNA-Array-Based Transcriptional Analysis of the Clostridium acetobutylicum differentiation and degeneration programs" E. T. Papoutsakis, C. A. Tomas, K. V. Alsaker, H. P. J. Bonarius, W. T. Hendriksen, H. Yang, J. A. Beamish, and C. J. Paredes. 225th ACS National Meeting. New Orleans, Louisiana, USA. March 2003.
12. "Glucose and Glutamine Replacement for the Enhancement of Fed-Batch Processes Using CHO Cells". C. Altamirano, C. Paredes, J.J. Cairó and F. Gòdia. ESACT 16th Meeting. Lugano, Switzerland. April 1999.
11. "Modification of the Glycolitic Flux in Animal Cell Cultures Involving an Antisense RNA Approach". C. Paredes, J. Vives, E. Prats, L. Cornudella, F. Gòdia and J.J. Cairó. Metabolic Engineering II. Schloss Elmau, Elmau/Oberbayern, Germany. October 1998.
10. "Improvement of defined medium formulation for CHO cells by cholesterol and vitamins". C. Altamirano, C. Paredes, J.J. Cairó and F. Gòdia. 2nd European Symposium on Biochemical Engineering Science. Porto, Portugal. September 1998.
09. "Modification of Escherichia coli metabolic fluxes by metabolic engineering". P. Vila, C. Paredes, J.J. Cairó, and F. Gòdia. 2nd European Symposium on Biochemical Engineering Science. Porto, Portugal. September 1998.
08. "Metabolic Flux Modification by Means of Antisense RNA Techniques in a Hybridoma Cell Line". C. Paredes, E. Prats, J.J. Cairó, M. Plaza, F. Azorín, L. Cornudella and F. Gòdia. European Workshop on Animal Cell Engineering. Platja d'Aro, Spain. October-November 1997.
07. "Modification of Hybridoma Metabolism". J.J. Cairó, C. Paredes and F. Gòdia. ESACT 15th Meeting. Tours, France. September 1997.
06. "Effect of the Expression of Glutamine Synthetase Gene on the Intracellular Fluxes of a Hybridoma Cell Line". J.J. Cairó, C. Paredes, C.R. Bebbington, C. Solà and F. Gòdia. Recombinant DNA Biotechnology : Focus on Metabolic Engineering. Danvers, Massachusetts, USA. October 1996.
05. "Analisis del Metabolismo de Glucosa y Glutamina en una Línea Celular de Hibridoma Mediante el Cultivo en Continuo". A. Sanfeliu, J.J. Cairó, C. Paredes and F. Gòdia. BIOTEC '96. Valladolid, Spain. September 1996.
04. "Analysis of Intracellular Fluxes for a Hybridoma Cell Line". C. Paredes, A. Sanfeliu, J.J. Cairó and F. Gòdia. FEBS '96. Barcelona, Spain. July 1996.
03. "Estimation of Metabolic Fluxes Using Material Balances for a CHO Cell Line". H. Luebben, G. Kretzmer, C. Paredes, J.J. Cairó and F. Gòdia. ESACT 14th Meeting. Vilamoura, Portugal. May 1996.
02. "Analysis of Glucose and Glutamine Metabolism of Hybridoma Cells by Continuous Culture Experiments". A. Sanfeliu, C. Paredes, J.J. Cairó, and F. Gòdia. ESACT 14th Meeting. Vilamoura, Portugal. May 1996.
01. "Estimation of Metabolic Fluxes Using Material Balances and Experimental Validation with Magnetic Resonance for a Hybridoma Cell Line". J.J. Cairó, C. Paredes, A. Sanfeliu, C. Casas, G. González, C. Solà, and F. Gòdia. IX Biochemical Engineering Conference. Davos, Switzerland. May 1995.